Quantitative Biology Colloquium

Sodium Channels Pathologies and Statistical Issues in Pathogenicity Prediction

When

4 p.m., Sept. 25, 2018

Speaker

Alixx Encinas

Yiwen Liu

Joseph C. Watkins

Abstract

This talk will focus on the statistical insides of pathogenicity prediction, classification methodologies, and assessments. Our motivating example will use naive Bayes as a classifier, cross-validation, and receiver operating characteristics to assess its performance. We will then see how this applies to a family of sodium channels proteins, what the mutations in this protein family predicts and some insights into the prediction’s shortcomings.